PacBio sequencing of Giardia duodenalis: isolate P424 - SRA

SRX17532002: PacBio sequencing of Giardia duodenalis: isolate P424
1 PACBIO_SMRT (PacBio RS II) run: 124,644 spots, 787.5M bases, 517.4Mb downloads

Design: PacBio standard library preparation from 8 microgram high molecular weight genomic DNA generating average read length of > 6.000bp

Submitted by: Robert Koch-Institut

Study: Generation of highly contiguous genomes of Giardia duodenalis isolates

PRJNA879307 • SRP396690 • All experiments • All runs

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High-quality genome data sets for Giardia duodenalis are scarce. Here, we generated highly contiguous genomes by a hybrid PacBio/Illumina sequencing approach of four assemblage A (one AI from a cat, and three AII from humans) and five assemblage B isolates (from humans) derived by axenic culture from clinical samples.

Sample: Host was Homo sapiens

SAMN30804749 • SRS15080483 • All experiments • All runs

Organism: Giardia intestinalis

Library:

Name: P424-A5-longReads-1

Instrument: PacBio RS II

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 124,644 spots, 787.5M bases, 517.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR21529628	124,644	787.5M	517.4Mb	2022-10-04

ID:: 24410298

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